Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
HOXC8P31273 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HOXC8P31273 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC8P31273 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.52■□□□□ 0.24
HOXC8P31273 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.52■□□□□ 0.24
HOXC8P31273 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.52■□□□□ 0.24
HOXC8P31273 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.52■□□□□ 0.24
HOXC8P31273 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 KLF2P1-201ENST00000447438 1042 ntBASIC16.52■□□□□ 0.24
HOXC8P31273 RPL18P13-201ENST00000478088 569 ntBASIC16.52■□□□□ 0.24
HOXC8P31273 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.52■□□□□ 0.24
HOXC8P31273 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.52■□□□□ 0.24
HOXC8P31273 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.52■□□□□ 0.24
HOXC8P31273 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.52■□□□□ 0.24
HOXC8P31273 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.52■□□□□ 0.24
HOXC8P31273 AC091544.8-201ENST00000619490 361 ntBASIC16.52■□□□□ 0.24
HOXC8P31273 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.52■□□□□ 0.24
HOXC8P31273 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC8P31273 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.52■□□□□ 0.24
HOXC8P31273 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
HOXC8P31273 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HOXC8P31273 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HOXC8P31273 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.52■□□□□ 0.23
HOXC8P31273 PCDHA1-201ENST00000378133 2726 ntBASIC16.52■□□□□ 0.23
HOXC8P31273 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 AC112693.3-201ENST00000624819 1983 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC8P31273 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC8P31273 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HOXC8P31273 AC006058.4-201ENST00000624016 1670 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC8P31273 AL133466.1-201ENST00000447582 150 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HOXC8P31273 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC8P31273 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HOXC8P31273 BX088702.1-201ENST00000610784 235 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 AC079336.7-201ENST00000623428 1078 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 Z98259.2-201ENST00000641583 609 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC8P31273 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC8P31273 MROH4P-201ENST00000431302 1578 ntBASIC16.51■□□□□ 0.23
HOXC8P31273 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HOXC8P31273 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC8P31273 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms