Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HTR1BP28222 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HTR1BP28222 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HTR1BP28222 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 FAM45BP-202ENST00000592932 1624 ntBASIC15.4■□□□□ 0.06
HTR1BP28222 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.4■□□□□ 0.06
HTR1BP28222 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.4■□□□□ 0.06
HTR1BP28222 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 SLC25A47P1-201ENST00000531577 414 ntBASIC15.4■□□□□ 0.06
HTR1BP28222 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.4■□□□□ 0.06
HTR1BP28222 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 MIR5189-201ENST00000577370 114 ntBASIC15.4■□□□□ 0.06
HTR1BP28222 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HTR1BP28222 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.4■□□□□ 0.06
HTR1BP28222 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.4■□□□□ 0.06
HTR1BP28222 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 AC018665.1-201ENST00000622927 1362 ntBASIC15.39■□□□□ 0.05
HTR1BP28222 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HTR1BP28222 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.39■□□□□ 0.05
HTR1BP28222 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HTR1BP28222 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 AC079776.1-201ENST00000401540 1152 ntBASIC15.39■□□□□ 0.05
HTR1BP28222 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.39■□□□□ 0.05
HTR1BP28222 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.39■□□□□ 0.05
HTR1BP28222 AL355864.2-201ENST00000447420 863 ntBASIC15.39■□□□□ 0.05
HTR1BP28222 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
HTR1BP28222 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.39■□□□□ 0.05
HTR1BP28222 AP001063.1-201ENST00000568332 529 ntBASIC15.39■□□□□ 0.05
HTR1BP28222 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.39■□□□□ 0.05
HTR1BP28222 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.39■□□□□ 0.05
HTR1BP28222 AL512343.1-201ENST00000605837 169 ntBASIC15.39■□□□□ 0.05
HTR1BP28222 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.39■□□□□ 0.05
HTR1BP28222 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.39■□□□□ 0.05
HTR1BP28222 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.39■□□□□ 0.05
HTR1BP28222 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HTR1BP28222 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HTR1BP28222 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR1BP28222 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR1BP28222 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR1BP28222 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR1BP28222 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR1BP28222 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.38■□□□□ 0.05
HTR1BP28222 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HTR1BP28222 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HTR1BP28222 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms