Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 MIR661-201ENST00000384842 89 ntBASIC18.55■□□□□ 0.56
CHMLP26374 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.55■□□□□ 0.56
CHMLP26374 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMLP26374 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMLP26374 SERBP1P5-201ENST00000510079 1181 ntBASIC18.55■□□□□ 0.56
CHMLP26374 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMLP26374 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.55■□□□□ 0.56
CHMLP26374 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CHMLP26374 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMLP26374 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMLP26374 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CHMLP26374 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHMLP26374 SLC7A15P-201ENST00000424028 1363 ntBASIC18.55■□□□□ 0.56
CHMLP26374 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMLP26374 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 FAM45BP-202ENST00000592932 1624 ntBASIC18.54■□□□□ 0.56
CHMLP26374 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 MIR770-201ENST00000390219 98 ntBASIC18.54■□□□□ 0.56
CHMLP26374 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 HLA-K-203ENST00000430151 1046 ntBASIC18.54■□□□□ 0.56
CHMLP26374 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMLP26374 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMLP26374 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 RRP7BP-205ENST00000566851 833 ntBASIC18.54■□□□□ 0.56
CHMLP26374 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.54■□□□□ 0.56
CHMLP26374 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHMLP26374 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMLP26374 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMLP26374 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMLP26374 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHMLP26374 MEP1AP4-201ENST00000423244 1087 ntBASIC18.53■□□□□ 0.56
CHMLP26374 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.53■□□□□ 0.56
CHMLP26374 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHMLP26374 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.53■□□□□ 0.56
CHMLP26374 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHMLP26374 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMLP26374 AC099568.2-201ENST00000609194 695 ntBASIC18.53■□□□□ 0.56
CHMLP26374 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMLP26374 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMLP26374 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMLP26374 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMLP26374 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHMLP26374 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMLP26374 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMLP26374 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms