Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.16□□□□□ -0.3
BCL3P20749 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.16□□□□□ -0.3
BCL3P20749 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.16□□□□□ -0.3
BCL3P20749 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.16□□□□□ -0.3
BCL3P20749 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
BCL3P20749 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.16□□□□□ -0.3
BCL3P20749 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BCL3P20749 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 AC007686.3-201ENST00000619017 3487 ntBASIC13.15□□□□□ -0.3
BCL3P20749 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 AL121723.1-201ENST00000445194 1519 ntBASIC13.15□□□□□ -0.3
BCL3P20749 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.15□□□□□ -0.3
BCL3P20749 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 GHSR-202ENST00000427970 912 ntBASIC13.15□□□□□ -0.3
BCL3P20749 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 SDHAP3-202ENST00000515467 728 ntBASIC13.15□□□□□ -0.3
BCL3P20749 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.15□□□□□ -0.3
BCL3P20749 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.15□□□□□ -0.3
BCL3P20749 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.15□□□□□ -0.3
BCL3P20749 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 AC044860.1-202ENST00000559481 777 ntBASIC13.15□□□□□ -0.3
BCL3P20749 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.15□□□□□ -0.3
BCL3P20749 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
BCL3P20749 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.15□□□□□ -0.3
BCL3P20749 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.15□□□□□ -0.3
BCL3P20749 AP001160.2-201ENST00000596071 487 ntBASIC13.15□□□□□ -0.3
BCL3P20749 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BCL3P20749 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.15□□□□□ -0.3
BCL3P20749 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BCL3P20749 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.15□□□□□ -0.31
BCL3P20749 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
BCL3P20749 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
BCL3P20749 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
BCL3P20749 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
BCL3P20749 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.14□□□□□ -0.31
BCL3P20749 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.14□□□□□ -0.31
BCL3P20749 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.14□□□□□ -0.31
BCL3P20749 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.14□□□□□ -0.31
BCL3P20749 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.14□□□□□ -0.31
BCL3P20749 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.14□□□□□ -0.31
BCL3P20749 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
BCL3P20749 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BCL3P20749 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.14□□□□□ -0.31
BCL3P20749 FGD5P1-202ENST00000614866 2498 ntBASIC13.14□□□□□ -0.31
BCL3P20749 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.14□□□□□ -0.31
BCL3P20749 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms