Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
ATF1P18846 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ATF1P18846 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.59□□□□□ -0.23
ATF1P18846 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
ATF1P18846 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATF1P18846 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.59□□□□□ -0.23
ATF1P18846 HTR5BP-201ENST00000430851 1154 ntBASIC13.59□□□□□ -0.23
ATF1P18846 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
ATF1P18846 KRT18P58-201ENST00000527480 1120 ntBASIC13.59□□□□□ -0.23
ATF1P18846 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.59□□□□□ -0.23
ATF1P18846 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.59□□□□□ -0.23
ATF1P18846 MTDHP5-201ENST00000598980 586 ntBASIC13.59□□□□□ -0.23
ATF1P18846 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.59□□□□□ -0.23
ATF1P18846 AC055717.3-201ENST00000622967 595 ntBASIC13.59□□□□□ -0.23
ATF1P18846 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ATF1P18846 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
ATF1P18846 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ATF1P18846 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.59□□□□□ -0.23
ATF1P18846 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.59□□□□□ -0.23
ATF1P18846 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ATF1P18846 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATF1P18846 BEND3P1-201ENST00000421591 1944 ntBASIC13.58□□□□□ -0.23
ATF1P18846 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATF1P18846 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATF1P18846 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.58□□□□□ -0.23
ATF1P18846 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ATF1P18846 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.58□□□□□ -0.24
ATF1P18846 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ATF1P18846 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 AZGP1P1-201ENST00000411909 902 ntBASIC13.58□□□□□ -0.24
ATF1P18846 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.58□□□□□ -0.24
ATF1P18846 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.58□□□□□ -0.24
ATF1P18846 PGAM5P1-201ENST00000518923 814 ntBASIC13.58□□□□□ -0.24
ATF1P18846 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.58□□□□□ -0.24
ATF1P18846 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.58□□□□□ -0.24
ATF1P18846 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 AC097376.2-205ENST00000610159 5334 ntBASIC13.58□□□□□ -0.24
ATF1P18846 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.58□□□□□ -0.24
ATF1P18846 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ATF1P18846 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ATF1P18846 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATF1P18846 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ATF1P18846 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms