Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.2■□□□□ 0.66
ITGB4P16144 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.2■□□□□ 0.66
ITGB4P16144 MIR3188-201ENST00000583494 85 ntBASIC19.2■□□□□ 0.66
ITGB4P16144 AL022334.2-201ENST00000610000 484 ntBASIC19.2■□□□□ 0.66
ITGB4P16144 BX088702.1-201ENST00000610784 235 ntBASIC19.2■□□□□ 0.66
ITGB4P16144 HLA-C-210ENST00000640219 976 ntBASIC19.2■□□□□ 0.66
ITGB4P16144 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
ITGB4P16144 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITGB4P16144 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITGB4P16144 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.2■□□□□ 0.66
ITGB4P16144 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.19■□□□□ 0.66
ITGB4P16144 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.19■□□□□ 0.66
ITGB4P16144 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19.19■□□□□ 0.66
ITGB4P16144 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ITGB4P16144 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ITGB4P16144 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.19■□□□□ 0.66
ITGB4P16144 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.19■□□□□ 0.66
ITGB4P16144 XBP1P1-201ENST00000436573 652 ntBASIC19.19■□□□□ 0.66
ITGB4P16144 DUTP3-201ENST00000450025 415 ntBASIC19.19■□□□□ 0.66
ITGB4P16144 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.19■□□□□ 0.66
ITGB4P16144 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.19■□□□□ 0.66
ITGB4P16144 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.19■□□□□ 0.66
ITGB4P16144 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.19■□□□□ 0.66
ITGB4P16144 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.19■□□□□ 0.66
ITGB4P16144 AC025262.2-201ENST00000623975 1056 ntBASIC19.19■□□□□ 0.66
ITGB4P16144 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ITGB4P16144 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.19■□□□□ 0.66
ITGB4P16144 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.19■□□□□ 0.66
ITGB4P16144 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.19■□□□□ 0.66
ITGB4P16144 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ITGB4P16144 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.19■□□□□ 0.66
ITGB4P16144 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.19■□□□□ 0.66
ITGB4P16144 AC144522.1-201ENST00000625111 1658 ntBASIC19.19■□□□□ 0.66
ITGB4P16144 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.19■□□□□ 0.66
ITGB4P16144 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGB4P16144 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.18■□□□□ 0.66
ITGB4P16144 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGB4P16144 FTH1P22-201ENST00000456305 520 ntBASIC19.18■□□□□ 0.66
ITGB4P16144 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.18■□□□□ 0.66
ITGB4P16144 AP002803.1-201ENST00000528836 498 ntBASIC19.18■□□□□ 0.66
ITGB4P16144 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.18■□□□□ 0.66
ITGB4P16144 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ITGB4P16144 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGB4P16144 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGB4P16144 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ITGB4P16144 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
ITGB4P16144 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ITGB4P16144 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 AC239868.1-201ENST00000369385 493 ntBASIC19.18■□□□□ 0.66
ITGB4P16144 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 AL583805.1-201ENST00000391389 531 ntBASIC19.18■□□□□ 0.66
ITGB4P16144 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.18■□□□□ 0.66
ITGB4P16144 RPL18AP3-201ENST00000462885 528 ntBASIC19.18■□□□□ 0.66
ITGB4P16144 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.18■□□□□ 0.66
ITGB4P16144 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.18■□□□□ 0.66
ITGB4P16144 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.18■□□□□ 0.66
ITGB4P16144 AC131206.1-201ENST00000538078 1211 ntBASIC19.18■□□□□ 0.66
ITGB4P16144 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.18■□□□□ 0.66
ITGB4P16144 MIR6842-201ENST00000612539 65 ntBASIC19.18■□□□□ 0.66
ITGB4P16144 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGB4P16144 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 AC013726.1-201ENST00000563747 2285 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 AC025271.4-201ENST00000621477 1726 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGB4P16144 KRT18P9-201ENST00000604826 1300 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 AP005117.1-202ENST00000581724 1908 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGB4P16144 KRT18P66-201ENST00000452970 1269 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGB4P16144 MRPL22P1-201ENST00000505398 616 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 AC008723.1-201ENST00000506922 207 ntBASIC19.17■□□□□ 0.66
ITGB4P16144 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ITGB4P16144 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms