Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.12■□□□□ 0.33
COL11A1P12107 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.12■□□□□ 0.33
COL11A1P12107 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL11A1P12107 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 FTLP1-201ENST00000449155 526 ntBASIC17.12■□□□□ 0.33
COL11A1P12107 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.12■□□□□ 0.33
COL11A1P12107 AC024681.1-201ENST00000521917 487 ntBASIC17.12■□□□□ 0.33
COL11A1P12107 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.12■□□□□ 0.33
COL11A1P12107 RN7SL190P-201ENST00000582519 257 ntBASIC17.12■□□□□ 0.33
COL11A1P12107 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.12■□□□□ 0.33
COL11A1P12107 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
COL11A1P12107 YRDCP1-201ENST00000621419 643 ntBASIC17.12■□□□□ 0.33
COL11A1P12107 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.12■□□□□ 0.33
COL11A1P12107 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.12■□□□□ 0.33
COL11A1P12107 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
COL11A1P12107 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
COL11A1P12107 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 MIR33B-201ENST00000385104 96 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.11■□□□□ 0.33
COL11A1P12107 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 AL353637.1-201ENST00000451571 732 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
COL11A1P12107 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.11■□□□□ 0.33
COL11A1P12107 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 DUX4L46-201ENST00000566845 751 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.11■□□□□ 0.33
COL11A1P12107 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.11■□□□□ 0.33
COL11A1P12107 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 AC100757.4-201ENST00000626934 759 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 FAM90A7P-201ENST00000382628 1395 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 FAM90A23P-201ENST00000400136 1395 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 AL590440.2-201ENST00000641973 1595 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.11■□□□□ 0.33
COL11A1P12107 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 AC007950.2-201ENST00000615045 2347 ntBASIC17.11■□□□□ 0.33
COL11A1P12107 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.11■□□□□ 0.33
COL11A1P12107 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.11■□□□□ 0.33
COL11A1P12107 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL11A1P12107 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COL11A1P12107 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.1■□□□□ 0.33
COL11A1P12107 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 CEP164P1-201ENST00000455142 418 ntBASIC17.1■□□□□ 0.33
COL11A1P12107 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 AL157813.1-201ENST00000612996 587 ntBASIC17.1■□□□□ 0.33
COL11A1P12107 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 SSR4P1-203ENST00000599569 2260 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms