Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
CD28P10747 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.09□□□□□ -0.47
CD28P10747 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CD28P10747 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.09□□□□□ -0.47
CD28P10747 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 MIR1908-201ENST00000410394 80 ntBASIC12.09□□□□□ -0.47
CD28P10747 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CD28P10747 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 AL355994.2-201ENST00000447882 704 ntBASIC12.09□□□□□ -0.47
CD28P10747 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.09□□□□□ -0.47
CD28P10747 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 FAM8A2P-201ENST00000528813 1142 ntBASIC12.09□□□□□ -0.47
CD28P10747 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.09□□□□□ -0.47
CD28P10747 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.09□□□□□ -0.47
CD28P10747 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.09□□□□□ -0.47
CD28P10747 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.09□□□□□ -0.47
CD28P10747 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 AL513523.2-202ENST00000427283 2040 ntBASIC12.09□□□□□ -0.47
CD28P10747 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
CD28P10747 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CD28P10747 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD28P10747 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
CD28P10747 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.08□□□□□ -0.47
CD28P10747 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CD28P10747 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CD28P10747 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CD28P10747 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CD28P10747 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 ACKR1-201ENST00000368121 1240 ntBASIC12.08□□□□□ -0.48
CD28P10747 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.08□□□□□ -0.48
CD28P10747 AC026954.1-201ENST00000429771 1293 ntBASIC12.08□□□□□ -0.48
CD28P10747 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.08□□□□□ -0.48
CD28P10747 AC022137.2-201ENST00000503482 481 ntBASIC12.08□□□□□ -0.48
CD28P10747 RNA5SP412-201ENST00000516234 123 ntBASIC12.08□□□□□ -0.48
CD28P10747 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.08□□□□□ -0.48
CD28P10747 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.08□□□□□ -0.48
CD28P10747 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 KRT90P-201ENST00000549264 1064 ntBASIC12.08□□□□□ -0.48
CD28P10747 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.08□□□□□ -0.48
CD28P10747 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 GPR182-203ENST00000622922 591 ntBASIC12.08□□□□□ -0.48
CD28P10747 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CD28P10747 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.08□□□□□ -0.48
CD28P10747 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CD28P10747 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD28P10747 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms