Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PTPRFP10586 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPRFP10586 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPRFP10586 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPRFP10586 AC012508.2-201ENST00000567613 1472 ntBASIC17.27■□□□□ 0.35
PTPRFP10586 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPRFP10586 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PTPRFP10586 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PTPRFP10586 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.35
PTPRFP10586 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.27■□□□□ 0.35
PTPRFP10586 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.35
PTPRFP10586 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPRFP10586 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.27■□□□□ 0.35
PTPRFP10586 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.27■□□□□ 0.35
PTPRFP10586 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PTPRFP10586 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.27■□□□□ 0.35
PTPRFP10586 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.27■□□□□ 0.35
PTPRFP10586 NAP1L6-202ENST00000641404 1222 ntBASIC17.27■□□□□ 0.35
PTPRFP10586 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
PTPRFP10586 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.27■□□□□ 0.35
PTPRFP10586 AC092850.2-201ENST00000623821 2697 ntBASIC17.27■□□□□ 0.35
PTPRFP10586 AL513523.2-202ENST00000427283 2040 ntBASIC17.26■□□□□ 0.35
PTPRFP10586 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPRFP10586 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTPRFP10586 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTPRFP10586 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 OR2K2-202ENST00000374428 1038 ntBASIC17.26■□□□□ 0.35
PTPRFP10586 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPRFP10586 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPRFP10586 TMCO5B-205ENST00000530020 894 ntBASIC17.26■□□□□ 0.35
PTPRFP10586 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPRFP10586 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPRFP10586 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.26■□□□□ 0.35
PTPRFP10586 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.26■□□□□ 0.35
PTPRFP10586 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.26■□□□□ 0.35
PTPRFP10586 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPRFP10586 COX6A1P2-201ENST00000620597 330 ntBASIC17.26■□□□□ 0.35
PTPRFP10586 AC007718.1-201ENST00000621078 280 ntBASIC17.26■□□□□ 0.35
PTPRFP10586 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPRFP10586 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPRFP10586 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPRFP10586 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPRFP10586 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPRFP10586 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPRFP10586 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPRFP10586 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPRFP10586 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPRFP10586 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPRFP10586 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 AC136759.1-202ENST00000530858 2194 ntBASIC17.25■□□□□ 0.35
PTPRFP10586 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PTPRFP10586 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 RN7SL8P-201ENST00000461771 266 ntBASIC17.25■□□□□ 0.35
PTPRFP10586 AC006122.1-201ENST00000493323 440 ntBASIC17.25■□□□□ 0.35
PTPRFP10586 GCOM2-201ENST00000509133 1104 ntBASIC17.25■□□□□ 0.35
PTPRFP10586 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPRFP10586 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPRFP10586 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.25■□□□□ 0.35
PTPRFP10586 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPRFP10586 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPRFP10586 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PTPRFP10586 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPRFP10586 AC007881.3-201ENST00000608897 607 ntBASIC17.25■□□□□ 0.35
PTPRFP10586 LINC01165-201ENST00000445190 1623 ntBASIC17.25■□□□□ 0.35
PTPRFP10586 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTPRFP10586 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PTPRFP10586 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
PTPRFP10586 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 RNA5SP359-201ENST00000364838 113 ntBASIC17.25■□□□□ 0.35
PTPRFP10586 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPRFP10586 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms