Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AC025279.2-201ENST00000569730 653 ntBASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AC244669.2-201ENST00000612320 853 ntBASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AC067930.6-201ENST00000623257 4947 ntBASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 MIR1908-201ENST00000410394 80 ntBASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 NUS1P3-201ENST00000423502 862 ntBASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 DUX4L45-201ENST00000566406 1057 ntBASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 MIR4525-201ENST00000580000 75 ntBASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 AC008687.7-202ENST00000637404 953 ntBASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40ALP0C0E4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 BRWD1P1-201ENST00000401091 371 ntBASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 AC023310.1-201ENST00000554836 735 ntBASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RN7SL219P-201ENST00000582872 296 ntBASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms