Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLTAP09496 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLTAP09496 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 DRD5P1-201ENST00000456605 1438 ntBASIC16.9■□□□□ 0.3
CLTAP09496 KRT8P22-201ENST00000562317 1415 ntBASIC16.9■□□□□ 0.3
CLTAP09496 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLTAP09496 AL512384.1-201ENST00000406683 331 ntBASIC16.9■□□□□ 0.3
CLTAP09496 KRT17P7-201ENST00000451704 1104 ntBASIC16.9■□□□□ 0.3
CLTAP09496 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.9■□□□□ 0.3
CLTAP09496 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.9■□□□□ 0.3
CLTAP09496 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 AC124283.3-201ENST00000570869 594 ntBASIC16.9■□□□□ 0.3
CLTAP09496 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.9■□□□□ 0.3
CLTAP09496 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.9■□□□□ 0.3
CLTAP09496 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.9■□□□□ 0.3
CLTAP09496 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.9■□□□□ 0.3
CLTAP09496 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.9■□□□□ 0.3
CLTAP09496 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.9■□□□□ 0.3
CLTAP09496 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLTAP09496 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.9■□□□□ 0.3
CLTAP09496 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.9■□□□□ 0.3
CLTAP09496 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLTAP09496 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLTAP09496 AC084364.1-201ENST00000551967 1556 ntBASIC16.89■□□□□ 0.3
CLTAP09496 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.89■□□□□ 0.3
CLTAP09496 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.89■□□□□ 0.3
CLTAP09496 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 SSR4P1-203ENST00000599569 2260 ntBASIC16.89■□□□□ 0.29
CLTAP09496 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CLTAP09496 TNRC18P2-201ENST00000417666 2714 ntBASIC16.89■□□□□ 0.29
CLTAP09496 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CLTAP09496 AC136621.1-201ENST00000624017 2304 ntBASIC16.89■□□□□ 0.29
CLTAP09496 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 SOCS2P1-201ENST00000417727 557 ntBASIC16.89■□□□□ 0.29
CLTAP09496 AL162726.2-201ENST00000438986 1017 ntBASIC16.89■□□□□ 0.29
CLTAP09496 RN7SL837P-201ENST00000463010 287 ntBASIC16.89■□□□□ 0.29
CLTAP09496 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.89■□□□□ 0.29
CLTAP09496 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLTAP09496 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLTAP09496 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLTAP09496 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.89■□□□□ 0.29
CLTAP09496 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.89■□□□□ 0.29
CLTAP09496 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.89■□□□□ 0.29
CLTAP09496 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLTAP09496 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CLTAP09496 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLTAP09496 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLTAP09496 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.88■□□□□ 0.29
CLTAP09496 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms