Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
APPP05067 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.54■□□□□ 0.56
APPP05067 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
APPP05067 SOCS2P1-201ENST00000417727 557 ntBASIC18.54■□□□□ 0.56
APPP05067 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.54■□□□□ 0.56
APPP05067 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
APPP05067 AC132938.2-201ENST00000579188 680 ntBASIC18.54■□□□□ 0.56
APPP05067 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.54■□□□□ 0.56
APPP05067 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.54■□□□□ 0.56
APPP05067 CU634019.7-201ENST00000624153 1185 ntBASIC18.54■□□□□ 0.56
APPP05067 FP236241.2-201ENST00000624906 1185 ntBASIC18.54■□□□□ 0.56
APPP05067 AL591163.1-201ENST00000641757 987 ntBASIC18.54■□□□□ 0.56
APPP05067 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.54■□□□□ 0.56
APPP05067 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 SSR4P1-203ENST00000599569 2260 ntBASIC18.54■□□□□ 0.56
APPP05067 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APPP05067 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
APPP05067 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APPP05067 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
APPP05067 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.53■□□□□ 0.56
APPP05067 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.53■□□□□ 0.56
APPP05067 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.53■□□□□ 0.56
APPP05067 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
APPP05067 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.53■□□□□ 0.56
APPP05067 AC107373.2-201ENST00000607735 490 ntBASIC18.53■□□□□ 0.56
APPP05067 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
APPP05067 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
APPP05067 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
APPP05067 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.53■□□□□ 0.56
APPP05067 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
APPP05067 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
APPP05067 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APPP05067 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
APPP05067 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
APPP05067 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.52■□□□□ 0.56
APPP05067 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
APPP05067 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 AC063926.2-201ENST00000623766 1308 ntBASIC18.52■□□□□ 0.56
APPP05067 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
APPP05067 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.52■□□□□ 0.56
APPP05067 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.52■□□□□ 0.56
APPP05067 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.52■□□□□ 0.56
APPP05067 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.52■□□□□ 0.56
APPP05067 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
APPP05067 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.52■□□□□ 0.56
APPP05067 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.52■□□□□ 0.56
APPP05067 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 GAPDHP21-201ENST00000450301 1010 ntBASIC18.52■□□□□ 0.56
APPP05067 RN7SL837P-201ENST00000463010 287 ntBASIC18.52■□□□□ 0.56
APPP05067 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.52■□□□□ 0.56
APPP05067 AC026410.3-201ENST00000514280 936 ntBASIC18.52■□□□□ 0.56
APPP05067 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.52■□□□□ 0.56
APPP05067 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.52■□□□□ 0.56
APPP05067 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.52■□□□□ 0.56
APPP05067 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
APPP05067 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
APPP05067 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APPP05067 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.52■□□□□ 0.56
APPP05067 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APPP05067 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
APPP05067 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
APPP05067 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
APPP05067 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
APPP05067 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.52■□□□□ 0.55
APPP05067 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.52■□□□□ 0.55
APPP05067 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APPP05067 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APPP05067 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
APPP05067 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APPP05067 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
APPP05067 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APPP05067 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
APPP05067 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms