Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A1P02462 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A1P02462 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A1P02462 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A1P02462 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
COL4A1P02462 AL161670.2-201ENST00000557650 1227 ntBASIC18.41■□□□□ 0.54
COL4A1P02462 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A1P02462 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.41■□□□□ 0.54
COL4A1P02462 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A1P02462 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A1P02462 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A1P02462 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.4■□□□□ 0.54
COL4A1P02462 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 MROH4P-201ENST00000431302 1578 ntBASIC18.4■□□□□ 0.54
COL4A1P02462 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.4■□□□□ 0.54
COL4A1P02462 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.4■□□□□ 0.54
COL4A1P02462 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.4■□□□□ 0.54
COL4A1P02462 AC100827.2-201ENST00000563214 1194 ntBASIC18.4■□□□□ 0.54
COL4A1P02462 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A1P02462 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COL4A1P02462 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A1P02462 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.4■□□□□ 0.54
COL4A1P02462 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A1P02462 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COL4A1P02462 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COL4A1P02462 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A1P02462 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.39■□□□□ 0.54
COL4A1P02462 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 PPT1-215ENST00000641471 2368 ntBASIC18.39■□□□□ 0.53
COL4A1P02462 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.39■□□□□ 0.53
COL4A1P02462 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COL4A1P02462 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.39■□□□□ 0.53
COL4A1P02462 SSR4P1-203ENST00000599569 2260 ntBASIC18.39■□□□□ 0.53
COL4A1P02462 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.39■□□□□ 0.53
COL4A1P02462 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL4A1P02462 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL4A1P02462 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.39■□□□□ 0.53
COL4A1P02462 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.39■□□□□ 0.53
COL4A1P02462 AL157407.1-201ENST00000435784 904 ntBASIC18.39■□□□□ 0.53
COL4A1P02462 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.39■□□□□ 0.53
COL4A1P02462 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.39■□□□□ 0.53
COL4A1P02462 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.39■□□□□ 0.53
COL4A1P02462 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.39■□□□□ 0.53
COL4A1P02462 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.39■□□□□ 0.53
COL4A1P02462 AC020922.3-201ENST00000595064 547 ntBASIC18.39■□□□□ 0.53
COL4A1P02462 AL132994.2-201ENST00000603120 687 ntBASIC18.39■□□□□ 0.53
COL4A1P02462 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.39■□□□□ 0.53
COL4A1P02462 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.39■□□□□ 0.53
COL4A1P02462 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL4A1P02462 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COL4A1P02462 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COL4A1P02462 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL4A1P02462 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL4A1P02462 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL4A1P02462 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL4A1P02462 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.38■□□□□ 0.53
COL4A1P02462 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL4A1P02462 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL4A1P02462 AC234782.1-201ENST00000451950 919 ntBASIC18.38■□□□□ 0.53
COL4A1P02462 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.38■□□□□ 0.53
COL4A1P02462 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.38■□□□□ 0.53
COL4A1P02462 GCOM2-201ENST00000509133 1104 ntBASIC18.38■□□□□ 0.53
COL4A1P02462 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.38■□□□□ 0.53
COL4A1P02462 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms