Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SIX6O95475 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.98□□□□□ -0.33
SIX6O95475 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.97□□□□□ -0.33
SIX6O95475 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SIX6O95475 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.97□□□□□ -0.33
SIX6O95475 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SIX6O95475 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SIX6O95475 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.97□□□□□ -0.33
SIX6O95475 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.97□□□□□ -0.33
SIX6O95475 NUS1P2-201ENST00000417358 873 ntBASIC12.97□□□□□ -0.33
SIX6O95475 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 LINC00265-3P-201ENST00000447588 903 ntBASIC12.97□□□□□ -0.33
SIX6O95475 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.97□□□□□ -0.33
SIX6O95475 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.97□□□□□ -0.33
SIX6O95475 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.97□□□□□ -0.33
SIX6O95475 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.97□□□□□ -0.33
SIX6O95475 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.97□□□□□ -0.33
SIX6O95475 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.97□□□□□ -0.33
SIX6O95475 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.97□□□□□ -0.33
SIX6O95475 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SIX6O95475 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.97□□□□□ -0.33
SIX6O95475 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.97□□□□□ -0.33
SIX6O95475 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.97□□□□□ -0.33
SIX6O95475 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.97□□□□□ -0.33
SIX6O95475 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SIX6O95475 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.97□□□□□ -0.33
SIX6O95475 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.96□□□□□ -0.33
SIX6O95475 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SIX6O95475 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 DRAXINP1-201ENST00000437611 948 ntBASIC12.96□□□□□ -0.33
SIX6O95475 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.96□□□□□ -0.33
SIX6O95475 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SIX6O95475 AL591684.3-201ENST00000605187 298 ntBASIC12.96□□□□□ -0.33
SIX6O95475 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SIX6O95475 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.96□□□□□ -0.33
SIX6O95475 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SIX6O95475 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SIX6O95475 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms