Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SIX3O95343 AC073592.8-201ENST00000624126 511 ntBASIC15.11■□□□□ 0.01
SIX3O95343 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX3O95343 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SIX3O95343 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 REXO1L4P-201ENST00000605109 1937 ntBASIC15.11■□□□□ 0.01
SIX3O95343 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SIX3O95343 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SIX3O95343 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SIX3O95343 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SIX3O95343 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.11■□□□□ 0.01
SIX3O95343 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SIX3O95343 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIX3O95343 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SIX3O95343 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SIX3O95343 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX3O95343 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SIX3O95343 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.1■□□□□ 0.01
SIX3O95343 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX3O95343 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.1■□□□□ 0.01
SIX3O95343 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.1■□□□□ 0.01
SIX3O95343 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SIX3O95343 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX3O95343 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SIX3O95343 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX3O95343 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SIX3O95343 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.1■□□□□ 0.01
SIX3O95343 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX3O95343 AC005912.2-201ENST00000619492 2400 ntBASIC15.09■□□□□ 0.01
SIX3O95343 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 AC007191.1-201ENST00000623179 2995 ntBASIC15.09■□□□□ 0.01
SIX3O95343 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SIX3O95343 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.09■□□□□ 0.01
SIX3O95343 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX3O95343 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SIX3O95343 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX3O95343 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 TOMM22P5-201ENST00000416399 439 ntBASIC15.09■□□□□ 0.01
SIX3O95343 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.09■□□□□ 0.01
SIX3O95343 KLF2P3-201ENST00000451977 1087 ntBASIC15.09■□□□□ 0.01
SIX3O95343 KRT18P43-201ENST00000469825 1281 ntBASIC15.09■□□□□ 0.01
SIX3O95343 AC069120.2-201ENST00000524091 540 ntBASIC15.09■□□□□ 0.01
SIX3O95343 AC027369.6-201ENST00000525520 931 ntBASIC15.09■□□□□ 0.01
SIX3O95343 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.09■□□□□ 0.01
SIX3O95343 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 AC044860.1-202ENST00000559481 777 ntBASIC15.09■□□□□ 0.01
SIX3O95343 AC004449.1-201ENST00000564240 433 ntBASIC15.09■□□□□ 0.01
SIX3O95343 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX3O95343 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
SIX3O95343 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 INTS4P1-203ENST00000641008 3683 ntBASIC15.09■□□□□ 0.01
SIX3O95343 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.09■□□□□ 0.01
SIX3O95343 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
SIX3O95343 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX3O95343 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX3O95343 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
SIX3O95343 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.08■□□□□ 0.01
SIX3O95343 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SIX3O95343 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms