Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX2-2O95096 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NKX2-2O95096 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX2-2O95096 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NKX2-2O95096 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX2-2O95096 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX2-2O95096 AC067930.6-201ENST00000623257 4947 ntBASIC14.2□□□□□ -0.14
NKX2-2O95096 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 AJ011931.1-201ENST00000618749 2492 ntBASIC14.2□□□□□ -0.14
NKX2-2O95096 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 AC013726.1-201ENST00000563747 2285 ntBASIC14.2□□□□□ -0.14
NKX2-2O95096 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NKX2-2O95096 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NKX2-2O95096 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
NKX2-2O95096 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX2-2O95096 AC124283.3-201ENST00000570869 594 ntBASIC14.2□□□□□ -0.14
NKX2-2O95096 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX2-2O95096 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-2O95096 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 AL359258.3-201ENST00000622910 2331 ntBASIC14.2□□□□□ -0.14
NKX2-2O95096 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX2-2O95096 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-2O95096 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-2O95096 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 KRT8P22-201ENST00000562317 1415 ntBASIC14.19□□□□□ -0.14
NKX2-2O95096 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 C1QBPP1-201ENST00000400117 770 ntBASIC14.19□□□□□ -0.14
NKX2-2O95096 PIN1P1-201ENST00000412108 996 ntBASIC14.19□□□□□ -0.14
NKX2-2O95096 NUS1P3-201ENST00000423502 862 ntBASIC14.19□□□□□ -0.14
NKX2-2O95096 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 MYCLP2-201ENST00000449268 967 ntBASIC14.19□□□□□ -0.14
NKX2-2O95096 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX2-2O95096 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX2-2O95096 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX2-2O95096 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX2-2O95096 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX2-2O95096 AC007431.3-201ENST00000623221 587 ntBASIC14.19□□□□□ -0.14
NKX2-2O95096 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms