Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CPNE3O75131 BOLA2P3-201ENST00000404566 256 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 MIR1909-201ENST00000411312 80 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE3O75131 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.9□□□□□ -0.02
CPNE3O75131 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.9□□□□□ -0.02
CPNE3O75131 SERPINA7P1-201ENST00000443077 631 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE3O75131 AL359711.2-201ENST00000563105 872 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE3O75131 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.9□□□□□ -0.02
CPNE3O75131 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE3O75131 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE3O75131 AL049840.4-201ENST00000602422 811 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 AC097359.3-201ENST00000603982 1210 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE3O75131 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.9□□□□□ -0.02
CPNE3O75131 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE3O75131 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE3O75131 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CPNE3O75131 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 MIR658-201ENST00000385210 100 ntBASIC14.89□□□□□ -0.03
CPNE3O75131 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.89□□□□□ -0.03
CPNE3O75131 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.89□□□□□ -0.03
CPNE3O75131 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.89□□□□□ -0.03
CPNE3O75131 ENPP7P5-201ENST00000541031 1031 ntBASIC14.89□□□□□ -0.03
CPNE3O75131 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.89□□□□□ -0.03
CPNE3O75131 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE3O75131 AL512343.1-201ENST00000605837 169 ntBASIC14.89□□□□□ -0.03
CPNE3O75131 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.89□□□□□ -0.03
CPNE3O75131 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 TNRC18P2-201ENST00000417666 2714 ntBASIC14.89□□□□□ -0.03
CPNE3O75131 SNX18-202ENST00000343017 3140 ntBASIC14.89□□□□□ -0.03
CPNE3O75131 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 AL596087.1-201ENST00000400979 1969 ntBASIC14.89□□□□□ -0.03
CPNE3O75131 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE3O75131 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.89□□□□□ -0.03
CPNE3O75131 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CPNE3O75131 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 FAM45BP-202ENST00000592932 1624 ntBASIC14.88□□□□□ -0.03
CPNE3O75131 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CPNE3O75131 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
CPNE3O75131 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.88□□□□□ -0.03
CPNE3O75131 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE3O75131 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CPNE3O75131 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CPNE3O75131 AC022210.1-201ENST00000449856 793 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms