Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AL662799.1-202ENST00000614205 422 ntBASIC13.76□□□□□ -0.21
TRAF3IP2O43734 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AGAP7P-201ENST00000582299 2062 ntBASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AGAP14-201ENST00000624701 2060 ntBASIC13.76□□□□□ -0.21
TRAF3IP2O43734 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 RN7SL204P-201ENST00000582831 262 ntBASIC13.75□□□□□ -0.21
TRAF3IP2O43734 AL132655.2-201ENST00000596276 594 ntBASIC13.75□□□□□ -0.21
TRAF3IP2O43734 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAF3IP2O43734 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 REXO1L4P-201ENST00000605109 1937 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 DRD5P1-201ENST00000456605 1438 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 WASH3P-207ENST00000560956 1394 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 TNRC18P2-201ENST00000417666 2714 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 VDAC1P7-201ENST00000462417 847 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 BRI3BPP1-201ENST00000594224 787 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 LINC02560-201ENST00000596379 459 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 AC107373.2-201ENST00000607735 490 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 AC008761.3-201ENST00000624803 892 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms