Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 AC084364.1-201ENST00000551967 1556 ntBASIC13.48□□□□□ -0.25
CCL21O00585 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL21O00585 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCL21O00585 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCL21O00585 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCL21O00585 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 AC055811.4-201ENST00000624039 1754 ntBASIC13.48□□□□□ -0.25
CCL21O00585 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL21O00585 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 AC069224.1-201ENST00000566372 1715 ntBASIC13.47□□□□□ -0.25
CCL21O00585 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCL21O00585 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCL21O00585 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL21O00585 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCL21O00585 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCL21O00585 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 GHSR-202ENST00000427970 912 ntBASIC13.47□□□□□ -0.25
CCL21O00585 EEF1DP6-201ENST00000449232 372 ntBASIC13.47□□□□□ -0.25
CCL21O00585 LDHBP1-201ENST00000455730 1119 ntBASIC13.47□□□□□ -0.25
CCL21O00585 NUP210P1-202ENST00000504322 710 ntBASIC13.47□□□□□ -0.25
CCL21O00585 AC013355.1-201ENST00000562625 723 ntBASIC13.47□□□□□ -0.25
CCL21O00585 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 RN7SL163P-201ENST00000583100 276 ntBASIC13.47□□□□□ -0.25
CCL21O00585 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 AC079336.7-201ENST00000623428 1078 ntBASIC13.47□□□□□ -0.25
CCL21O00585 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL21O00585 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL21O00585 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCL21O00585 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL21O00585 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL21O00585 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL21O00585 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 AC008132.1-202ENST00000342005 1389 ntBASIC13.46□□□□□ -0.25
CCL21O00585 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CCL21O00585 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CCL21O00585 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CCL21O00585 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CCL21O00585 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL21O00585 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL21O00585 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 DPM3-202ENST00000368399 517 ntBASIC13.46□□□□□ -0.25
CCL21O00585 MIR33B-201ENST00000385104 96 ntBASIC13.46□□□□□ -0.25
CCL21O00585 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL21O00585 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL21O00585 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL21O00585 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL21O00585 AC253536.4-201ENST00000440539 267 ntBASIC13.46□□□□□ -0.25
CCL21O00585 AC012618.1-201ENST00000461223 412 ntBASIC13.46□□□□□ -0.25
CCL21O00585 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL21O00585 AC024681.1-201ENST00000521917 487 ntBASIC13.46□□□□□ -0.25
CCL21O00585 AP003171.2-201ENST00000528208 925 ntBASIC13.46□□□□□ -0.25
CCL21O00585 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.46□□□□□ -0.25
CCL21O00585 MIR5572-201ENST00000583188 137 ntBASIC13.46□□□□□ -0.25
CCL21O00585 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL21O00585 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL21O00585 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL21O00585 AL645939.5-201ENST00000606834 243 ntBASIC13.46□□□□□ -0.25
CCL21O00585 AC026740.1-201ENST00000607068 791 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms