Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.29■□□□□ 0.04
TLR4O00206 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
TLR4O00206 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 AC006001.1-201ENST00000325130 474 ntBASIC15.28■□□□□ 0.04
TLR4O00206 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.28■□□□□ 0.04
TLR4O00206 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.28■□□□□ 0.04
TLR4O00206 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TLR4O00206 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TLR4O00206 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TLR4O00206 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TLR4O00206 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.27■□□□□ 0.04
TLR4O00206 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.27■□□□□ 0.04
TLR4O00206 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.27■□□□□ 0.04
TLR4O00206 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.27■□□□□ 0.04
TLR4O00206 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TLR4O00206 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TLR4O00206 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TLR4O00206 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.27■□□□□ 0.04
TLR4O00206 KRT8P35-201ENST00000483942 1338 ntBASIC15.27■□□□□ 0.04
TLR4O00206 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TLR4O00206 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TLR4O00206 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.27■□□□□ 0.04
TLR4O00206 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.27■□□□□ 0.04
TLR4O00206 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TLR4O00206 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TLR4O00206 FAM197Y7-201ENST00000432892 766 ntBASIC15.27■□□□□ 0.04
TLR4O00206 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TLR4O00206 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.27■□□□□ 0.04
TLR4O00206 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.27■□□□□ 0.04
TLR4O00206 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TLR4O00206 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.27■□□□□ 0.04
TLR4O00206 AC103810.3-201ENST00000583567 96 ntBASIC15.27■□□□□ 0.04
TLR4O00206 AL606495.2-201ENST00000605867 535 ntBASIC15.27■□□□□ 0.04
TLR4O00206 AC244093.1-201ENST00000610837 814 ntBASIC15.27■□□□□ 0.04
TLR4O00206 AC091271.1-201ENST00000611877 1162 ntBASIC15.27■□□□□ 0.04
TLR4O00206 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.27■□□□□ 0.04
TLR4O00206 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TLR4O00206 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TLR4O00206 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TLR4O00206 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TLR4O00206 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TLR4O00206 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TLR4O00206 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TLR4O00206 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms