Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 RNA5SP421-201ENST00000516864 134 ntBASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC162PA2VCL2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 GHSR-202ENST00000427970 912 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 INGX-202ENST00000489074 768 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 DOC2GP-202ENST00000514950 1163 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 AC023310.3-201ENST00000557027 670 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 AC100756.1-201ENST00000562736 682 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 AC138749.3-201ENST00000567691 622 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 AC116165.1-201ENST00000611806 668 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 LINC00528-201ENST00000600723 2160 ntBASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC162PA2VCL2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC162PA2VCL2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.46■□□□□ 0.06
CCDC162PA2VCL2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC162PA2VCL2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 SPDYE19P-201ENST00000338590 713 ntBASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 MIR770-201ENST00000390219 98 ntBASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 GNAQP1-201ENST00000444815 1067 ntBASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC162PA2VCL2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms