Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 TMBIM7P-203ENST00000641617 1718 ntBASIC21.86■■□□□ 1.09
CCDC144AA2RUR9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC144AA2RUR9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144AA2RUR9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC144AA2RUR9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 AC009093.2-202ENST00000620513 2079 ntBASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 API5-202ENST00000420461 2009 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 RHOQP1-201ENST00000555758 579 ntBASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 AL358472.3-201ENST00000608147 415 ntBASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 AC138028.6-201ENST00000616106 1482 ntBASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC144AA2RUR9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 AC136621.1-201ENST00000624017 2304 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 RN7SKP230-201ENST00000365642 335 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 SMS-201ENST00000379404 1174 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 AC126915.1-201ENST00000522847 1038 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 AC020914.3-201ENST00000594712 304 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 AC007950.2-201ENST00000615045 2347 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 MROH4P-201ENST00000431302 1578 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 LILRP1-201ENST00000444199 1370 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 INE2-201ENST00000630399 1874 ntBASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC144AA2RUR9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 BX284668.4-201ENST00000453917 508 ntBASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 RNA5SP423-201ENST00000517127 109 ntBASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 MIR4783-201ENST00000580343 82 ntBASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 AC007663.3-201ENST00000609632 465 ntBASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 OR6D1P-203ENST00000641209 4860 ntBASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC144AA2RUR9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC144AA2RUR9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.83■■□□□ 1.08
CCDC144AA2RUR9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC144AA2RUR9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC144AA2RUR9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC21.83■■□□□ 1.08
CCDC144AA2RUR9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms