Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 CICP17-201ENST00000418553 2377 ntBASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RCL1Q9Y2P8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 COL6A4P2-202ENST00000504443 2753 ntBASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 RPS8P6-201ENST00000426177 609 ntBASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 PRSS29P-201ENST00000440800 595 ntBASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 AF238378.1-201ENST00000526806 358 ntBASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 CLEC4GP1-201ENST00000596555 870 ntBASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.69□□□□□ -0.38
RCL1Q9Y2P8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AP001267.2-201ENST00000532619 2086 ntBASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AC092135.3-201ENST00000624151 1846 ntBASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 RPL5P21-201ENST00000404620 815 ntBASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 PHKG1P2-201ENST00000457537 863 ntBASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AC024267.1-201ENST00000582320 895 ntBASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AC011467.4-201ENST00000594891 528 ntBASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AL358472.4-201ENST00000633140 710 ntBASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RCL1Q9Y2P8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms