Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERGIC3Q9Y282 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERGIC3Q9Y282 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.18□□□□□ -0.14
ERGIC3Q9Y282 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ERGIC3Q9Y282 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 NUTM2HP-201ENST00000442076 2498 ntBASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AL513480.1-201ENST00000451731 511 ntBASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AC109635.5-201ENST00000533593 962 ntBASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ERGIC3Q9Y282 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 AL691432.1-201ENST00000596308 1422 ntBASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 OR7E47P-204ENST00000575924 449 ntBASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 BNIP3P1-202ENST00000550043 1585 ntBASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 AC097359.2-201ENST00000604992 2389 ntBASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERGIC3Q9Y282 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms