Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AC100827.2-201ENST00000563214 1194 ntBASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
ZC3H4Q9UPT8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
ZC3H4Q9UPT8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 AC103702.1-201ENST00000548801 2630 ntBASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 MIR4783-201ENST00000580343 82 ntBASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 AC127024.7-201ENST00000625101 200 ntBASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZC3H4Q9UPT8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 MESTP3-201ENST00000503460 968 ntBASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.44■□□□□ 0.54
ZC3H4Q9UPT8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms