Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 AC007551.1-201ENST00000457394 519 ntBASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 AC108725.1-201ENST00000495472 409 ntBASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 C18orf15-201ENST00000623680 2534 ntBASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN3Q9UPQ7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AC124283.3-201ENST00000570869 594 ntBASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AL139099.5-201ENST00000635274 300 ntBASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN3Q9UPQ7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 AC068418.2-201ENST00000577309 3703 ntBASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 AC004945.1-201ENST00000416738 983 ntBASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.86■□□□□ 0.77
PDZRN3Q9UPQ7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms