Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 AC133552.6-201ENST00000613406 534 ntBASIC14.53□□□□□ -0.08
CTSFQ9UBX1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 BX539320.1-201ENST00000623759 877 ntBASIC14.53□□□□□ -0.08
CTSFQ9UBX1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 PKD1P5-201ENST00000532415 10291 ntBASIC14.53□□□□□ -0.08
CTSFQ9UBX1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSFQ9UBX1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CTSFQ9UBX1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 ACKR1-201ENST00000368121 1240 ntBASIC14.52□□□□□ -0.09
CTSFQ9UBX1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AP005482.1-201ENST00000563722 1273 ntBASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.52□□□□□ -0.09
CTSFQ9UBX1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AC105250.1-201ENST00000509378 2057 ntBASIC14.52□□□□□ -0.09
CTSFQ9UBX1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.52□□□□□ -0.09
CTSFQ9UBX1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 AC007950.2-201ENST00000615045 2347 ntBASIC14.52□□□□□ -0.09
CTSFQ9UBX1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTSFQ9UBX1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSFQ9UBX1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms