Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 AC106820.3-201ENST00000561653 397 ntBASIC17.28■□□□□ 0.36
COL20A1Q9P218 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL20A1Q9P218 AP000845.1-201ENST00000581677 2131 ntBASIC17.28■□□□□ 0.36
COL20A1Q9P218 EEF1DP1-201ENST00000585891 896 ntBASIC17.28■□□□□ 0.36
COL20A1Q9P218 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL20A1Q9P218 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL20A1Q9P218 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL20A1Q9P218 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL20A1Q9P218 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL20A1Q9P218 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COL20A1Q9P218 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL20A1Q9P218 KRT8P44-201ENST00000441609 1350 ntBASIC17.28■□□□□ 0.36
COL20A1Q9P218 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 AC099548.2-209ENST00000480264 625 ntBASIC17.27■□□□□ 0.36
COL20A1Q9P218 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 COX5BP1-201ENST00000507622 393 ntBASIC17.27■□□□□ 0.36
COL20A1Q9P218 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 AL096828.3-201ENST00000615354 462 ntBASIC17.27■□□□□ 0.36
COL20A1Q9P218 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
COL20A1Q9P218 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL20A1Q9P218 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL20A1Q9P218 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL20A1Q9P218 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL20A1Q9P218 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
COL20A1Q9P218 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL20A1Q9P218 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL20A1Q9P218 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL20A1Q9P218 AC020907.1-201ENST00000616460 1350 ntBASIC17.27■□□□□ 0.35
COL20A1Q9P218 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.27■□□□□ 0.35
COL20A1Q9P218 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC023024.2-201ENST00000623561 1993 ntBASIC17.26■□□□□ 0.35
COL20A1Q9P218 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.26■□□□□ 0.35
COL20A1Q9P218 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 PFN1P12-201ENST00000455938 534 ntBASIC17.26■□□□□ 0.35
COL20A1Q9P218 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL20A1Q9P218 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.26■□□□□ 0.35
COL20A1Q9P218 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms