Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 AC099522.2-201ENST00000607001 744 ntBASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 AC005912.2-201ENST00000619492 2400 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 AC092127.1-201ENST00000567093 3455 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 MIR574-201ENST00000385209 96 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 AL355306.1-201ENST00000415580 579 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ACTG1P14-201ENST00000446382 1122 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SPDYE11-202ENST00000450699 704 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SPDYE9P-201ENST00000570642 692 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SPDYE10P-202ENST00000612005 668 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SPDYE8P-202ENST00000612377 668 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 AC126365.1-201ENST00000578585 1514 ntBASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PCDHB16Q9NRJ7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PCDHB16Q9NRJ7 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms