Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 IER3-202ENST00000376377 1350 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AL359649.1-201ENST00000607406 1741 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AP005117.1-201ENST00000584346 1413 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AC022784.5-201ENST00000522241 437 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AP000867.3-201ENST00000524675 377 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AL049597.2-201ENST00000565575 961 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AC012615.1-201ENST00000565797 1299 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AC090953.1-201ENST00000604305 1092 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 NPAP1P7-201ENST00000613027 823 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 TRIM80P-201ENST00000455685 2848 ntBASIC18.44■□□□□ 0.54
RTN4Q9NQC3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN4Q9NQC3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 AC064862.7-201ENST00000604520 867 ntBASIC18.43■□□□□ 0.54
RTN4Q9NQC3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms