Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AL031595.1-201ENST00000623969 4709 ntBASIC14.13□□□□□ -0.15
HMG20AQ9NP66 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 HCG4-201ENST00000418983 998 ntBASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AC087641.1-201ENST00000557561 1021 ntBASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AC005593.1-201ENST00000624894 515 ntBASIC14.13□□□□□ -0.15
HMG20AQ9NP66 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 AC152010.1-201ENST00000415779 2006 ntBASIC14.13□□□□□ -0.15
HMG20AQ9NP66 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMG20AQ9NP66 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.12□□□□□ -0.15
HMG20AQ9NP66 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms