Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 AL136982.4-201ENST00000437689 1740 ntBASIC13.97□□□□□ -0.17
USB1Q9BQ65 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 AC026748.1-201ENST00000624349 3251 ntBASIC13.97□□□□□ -0.17
USB1Q9BQ65 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
USB1Q9BQ65 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.97□□□□□ -0.17
USB1Q9BQ65 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC007541.1-201ENST00000570282 1469 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC005225.4-201ENST00000557330 545 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 TP53TG3HP-202ENST00000569755 579 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC140912.1-201ENST00000577171 1054 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC025048.3-201ENST00000590609 569 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 SRD5A3P1-201ENST00000603021 949 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC005702.4-201ENST00000618393 416 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 AC004840.1-201ENST00000636359 365 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
USB1Q9BQ65 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
USB1Q9BQ65 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.96□□□□□ -0.17
USB1Q9BQ65 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 AC106881.1-201ENST00000605849 3329 ntBASIC13.96□□□□□ -0.18
USB1Q9BQ65 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.96□□□□□ -0.18
USB1Q9BQ65 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
USB1Q9BQ65 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
USB1Q9BQ65 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.95□□□□□ -0.18
USB1Q9BQ65 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms