Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 AC134915.1-201ENST00000426461 574 ntBASIC15.66■□□□□ 0.1
SEMA3CQ99985 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 AC022494.1-201ENST00000466044 728 ntBASIC15.66■□□□□ 0.1
SEMA3CQ99985 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 ELK1P1-201ENST00000485699 580 ntBASIC15.66■□□□□ 0.1
SEMA3CQ99985 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 WASH4P-201ENST00000564273 1246 ntBASIC15.66■□□□□ 0.1
SEMA3CQ99985 TP53TG3HP-202ENST00000569755 579 ntBASIC15.66■□□□□ 0.1
SEMA3CQ99985 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 INTS4P2-202ENST00000614726 2019 ntBASIC15.66■□□□□ 0.1
SEMA3CQ99985 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 CU639417.3-201ENST00000624240 1404 ntBASIC15.66■□□□□ 0.1
SEMA3CQ99985 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SEMA3CQ99985 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SEMA3CQ99985 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 AL442647.2-201ENST00000429864 857 ntBASIC15.65■□□□□ 0.1
SEMA3CQ99985 ATP5G2P4-201ENST00000442175 420 ntBASIC15.65■□□□□ 0.1
SEMA3CQ99985 RN7SL692P-201ENST00000464677 288 ntBASIC15.65■□□□□ 0.1
SEMA3CQ99985 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 AC120045.2-201ENST00000567334 178 ntBASIC15.65■□□□□ 0.1
SEMA3CQ99985 CTBP2P3-201ENST00000585629 1255 ntBASIC15.65■□□□□ 0.1
SEMA3CQ99985 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SEMA3CQ99985 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SEMA3CQ99985 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
SEMA3CQ99985 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.64■□□□□ 0.09
SEMA3CQ99985 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SEMA3CQ99985 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.64■□□□□ 0.09
SEMA3CQ99985 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SEMA3CQ99985 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SEMA3CQ99985 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SEMA3CQ99985 DGCR5-201ENST00000399539 862 ntBASIC15.64■□□□□ 0.09
SEMA3CQ99985 GHSR-202ENST00000427970 912 ntBASIC15.64■□□□□ 0.09
SEMA3CQ99985 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms