Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AL354989.2-201ENST00000435838 1540 ntBASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC85AQ96PX6 AC020907.1-201ENST00000616460 1350 ntBASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 TPM3P8-201ENST00000330554 643 ntBASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AL139094.1-201ENST00000405549 1188 ntBASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 PFN1P12-201ENST00000455938 534 ntBASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AP006547.1-201ENST00000563435 692 ntBASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 AC006453.4-201ENST00000636949 1252 ntBASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 REXO1L5P-201ENST00000622260 2098 ntBASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC85AQ96PX6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 AC132872.4-202ENST00000622924 2756 ntBASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 AC105250.1-201ENST00000509378 2057 ntBASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 AC007969.1-201ENST00000433675 447 ntBASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 EIF3FP3-201ENST00000434851 1086 ntBASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 MIR3615-201ENST00000581999 87 ntBASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 PRSS30P-206ENST00000641773 873 ntBASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC85AQ96PX6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 AL157414.3-201ENST00000624276 1954 ntBASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms