Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 AC126177.1-201ENST00000547829 2218 ntBASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 RN7SL399P-201ENST00000471648 279 ntBASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 SLED1-202ENST00000512051 380 ntBASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SH3KBP1Q96B97 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 CLK3P2-201ENST00000427566 1453 ntBASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 AL512384.1-201ENST00000406683 331 ntBASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH3KBP1Q96B97 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 INE1-201ENST00000456273 945 ntBASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.34■□□□□ 0.05
SH3KBP1Q96B97 ELK1P1-201ENST00000485699 580 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms