Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 WASH3P-207ENST00000560956 1394 ntBASIC14.91□□□□□ -0.02
VPS33AQ96AX1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 FO538757.1-201ENST00000623083 1397 ntBASIC14.91□□□□□ -0.02
VPS33AQ96AX1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 KRT8P23-201ENST00000560090 1207 ntBASIC14.91□□□□□ -0.02
VPS33AQ96AX1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 AC069335.1-201ENST00000489972 472 ntBASIC14.9□□□□□ -0.02
VPS33AQ96AX1 RARRES2P9-201ENST00000565168 469 ntBASIC14.9□□□□□ -0.02
VPS33AQ96AX1 AL121894.2-201ENST00000602977 491 ntBASIC14.9□□□□□ -0.02
VPS33AQ96AX1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.9□□□□□ -0.02
VPS33AQ96AX1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS33AQ96AX1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms