Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 DUX4L47-201ENST00000566374 394 ntBASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 KRT8P31-201ENST00000504812 1408 ntBASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRUNE2Q8WUY3 AL807761.2-201ENST00000422849 729 ntBASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 FTH1P22-201ENST00000456305 520 ntBASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 ABHD17AP9-201ENST00000561925 548 ntBASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 AC023906.1-201ENST00000486386 453 ntBASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 ORAOV1P1-201ENST00000503108 395 ntBASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 RN7SL81P-201ENST00000493781 261 ntBASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.66■□□□□ 0.1
PRUNE2Q8WUY3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 AC092612.1-201ENST00000514501 998 ntBASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 AC007952.4-201ENST00000573866 637 ntBASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 MIR2392-201ENST00000584881 84 ntBASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 DUTP3-201ENST00000450025 415 ntBASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRUNE2Q8WUY3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms