Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 RN7SL837P-201ENST00000463010 287 ntBASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 RPL13AP25-201ENST00000484130 612 ntBASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AC015910.1-201ENST00000579400 975 ntBASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 BRI3BPP1-201ENST00000594224 787 ntBASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AL033527.5-201ENST00000641382 801 ntBASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AP005117.1-202ENST00000581724 1908 ntBASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FNDC9Q8TBE3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 VDAC1P7-201ENST00000462417 847 ntBASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AL359711.2-201ENST00000563105 872 ntBASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AC133539.2-201ENST00000604757 467 ntBASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 INTS4P2-202ENST00000614726 2019 ntBASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.94□□□□□ -0.18
FNDC9Q8TBE3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms