Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
COLGALT1Q8NBJ5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 ACTBP8-201ENST00000403258 1108 ntBASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 HOMER2P2-201ENST00000451621 847 ntBASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 AC005695.3-201ENST00000614522 232 ntBASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLGALT1Q8NBJ5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COLGALT1Q8NBJ5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
COLGALT1Q8NBJ5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COLGALT1Q8NBJ5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
COLGALT1Q8NBJ5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COLGALT1Q8NBJ5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COLGALT1Q8NBJ5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COLGALT1Q8NBJ5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 KLF2P2-201ENST00000416807 1039 ntBASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 CALR4P-201ENST00000431943 946 ntBASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 MTX1P1-201ENST00000440904 838 ntBASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLGALT1Q8NBJ5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLGALT1Q8NBJ5 AL139384.1-201ENST00000612143 3047 ntBASIC16.57■□□□□ 0.24
COLGALT1Q8NBJ5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.57■□□□□ 0.24
COLGALT1Q8NBJ5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms