Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 AC087045.2-201ENST00000606279 1003 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 BX088702.1-201ENST00000610784 235 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 MIR6720-201ENST00000611664 98 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 COX6A1P2-201ENST00000620597 330 ntBASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COL27A1Q8IZC6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 PRORSD1P-202ENST00000563365 2154 ntBASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC015909.3-201ENST00000572855 1794 ntBASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 RN7SL8P-201ENST00000461771 266 ntBASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC131206.1-201ENST00000538078 1211 ntBASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC008825.2-201ENST00000603374 718 ntBASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC092171.5-201ENST00000608012 942 ntBASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AC005618.3-201ENST00000624928 458 ntBASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COL27A1Q8IZC6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 AC013726.1-201ENST00000563747 2285 ntBASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 REXO1L2P-201ENST00000425429 2069 ntBASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 ZBED1P1-201ENST00000502364 1930 ntBASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL27A1Q8IZC6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms