Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 ELK2BP-201ENST00000415014 1224 ntBASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 TMPOP1-202ENST00000424642 1267 ntBASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 DUSP5P1-201ENST00000441325 1139 ntBASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 AC138894.3-201ENST00000603787 634 ntBASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 AC021097.1-201ENST00000607902 574 ntBASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 AL355877.3-201ENST00000622820 899 ntBASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 AC007326.2-201ENST00000624224 7579 ntBASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD2Q8IV50 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms