Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 RN7SL219P-201ENST00000582872 296 ntBASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 REXO1L4P-201ENST00000605109 1937 ntBASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE3BQ7Z3V4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 TPM3P8-201ENST00000330554 643 ntBASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 GHSR-202ENST00000427970 912 ntBASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 ENPP7P14-201ENST00000621765 1040 ntBASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE3BQ7Z3V4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 BRWD1P1-201ENST00000401091 371 ntBASIC19.1■□□□□ 0.65
UBE3BQ7Z3V4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms