Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 AL079307.3-201ENST00000556114 283 ntBASIC15.83■□□□□ 0.12
CASC4Q6P4E1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 LINC00528-201ENST00000600723 2160 ntBASIC15.83■□□□□ 0.12
CASC4Q6P4E1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASC4Q6P4E1 AC084364.1-201ENST00000551967 1556 ntBASIC15.83■□□□□ 0.12
CASC4Q6P4E1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 CETN4P-206ENST00000642099 2168 ntBASIC15.82■□□□□ 0.12
CASC4Q6P4E1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 AP001059.3-201ENST00000619053 235 ntBASIC15.82■□□□□ 0.12
CASC4Q6P4E1 MIR6069-201ENST00000620069 79 ntBASIC15.82■□□□□ 0.12
CASC4Q6P4E1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASC4Q6P4E1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 RPL5P21-201ENST00000404620 815 ntBASIC15.81■□□□□ 0.12
CASC4Q6P4E1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 CNN2P11-201ENST00000429351 262 ntBASIC15.81■□□□□ 0.12
CASC4Q6P4E1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 SNHG9-202ENST00000564014 471 ntBASIC15.81■□□□□ 0.12
CASC4Q6P4E1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms