Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 AP006294.1-201ENST00000415407 339 ntBASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 AP005018.1-201ENST00000525475 301 ntBASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ELK1P1-201ENST00000485699 580 ntBASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 AC092552.1-201ENST00000547243 906 ntBASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 AL596325.1-201ENST00000563991 1082 ntBASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 CU639417.3-201ENST00000624240 1404 ntBASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC39BQ5VTQ0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 TCAF2P1-201ENST00000291129 2421 ntBASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms