Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AL355306.1-201ENST00000415580 579 ntBASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AL671277.1-201ENST00000429656 993 ntBASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 RNA5SP419-201ENST00000515908 135 ntBASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AC004870.1-201ENST00000315132 882 ntBASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 MIR346-201ENST00000362234 95 ntBASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 FAAHP1-202ENST00000446499 1238 ntBASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 KRT18P56-201ENST00000507275 550 ntBASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 FAM86C2P-203ENST00000528684 1004 ntBASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AP000842.3-202ENST00000569238 1080 ntBASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00242Q5T6M2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms