Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 RPL13AP20-201ENST00000459725 609 ntBASIC16.32■□□□□ 0.2
VARS2Q5ST30 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 KRT8P2-201ENST00000556193 944 ntBASIC16.32■□□□□ 0.2
VARS2Q5ST30 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 AC068313.1-201ENST00000604028 1008 ntBASIC16.32■□□□□ 0.2
VARS2Q5ST30 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 DOC2GP-204ENST00000639052 2548 ntBASIC16.32■□□□□ 0.2
VARS2Q5ST30 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARS2Q5ST30 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.32■□□□□ 0.2
VARS2Q5ST30 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 AHCYP2-201ENST00000430630 1300 ntBASIC16.31■□□□□ 0.2
VARS2Q5ST30 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 RPL5P21-201ENST00000404620 815 ntBASIC16.31■□□□□ 0.2
VARS2Q5ST30 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 RN7SL560P-201ENST00000577943 264 ntBASIC16.31■□□□□ 0.2
VARS2Q5ST30 RN7SL48P-201ENST00000579283 293 ntBASIC16.31■□□□□ 0.2
VARS2Q5ST30 ECM1P1-201ENST00000604092 1279 ntBASIC16.31■□□□□ 0.2
VARS2Q5ST30 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 AC006453.4-201ENST00000636949 1252 ntBASIC16.31■□□□□ 0.2
VARS2Q5ST30 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.31■□□□□ 0.2
VARS2Q5ST30 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARS2Q5ST30 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 KRT8P14-201ENST00000414254 1442 ntBASIC16.3■□□□□ 0.2
VARS2Q5ST30 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms