Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 PIN1P1-201ENST00000412108 996 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AL442647.2-201ENST00000429864 857 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 RPL13AP25-201ENST00000484130 612 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 TERF1P3-201ENST00000505638 1227 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AC104596.2-201ENST00000512793 793 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AC092552.1-201ENST00000547243 906 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AC120045.2-201ENST00000567334 178 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AC124283.3-201ENST00000570869 594 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AC087499.6-201ENST00000411576 835 ntBASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 MYCLP2-201ENST00000449268 967 ntBASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 ELK1P1-201ENST00000485699 580 ntBASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AL359711.2-201ENST00000563105 872 ntBASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AC008494.3-201ENST00000606615 944 ntBASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN20Q4JDL3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PTPN20Q4JDL3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN20Q4JDL3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN20Q4JDL3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN20Q4JDL3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN20Q4JDL3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AC134915.1-201ENST00000426461 574 ntBASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AC004066.1-201ENST00000502488 802 ntBASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN20Q4JDL3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms