Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 AL360270.3-201ENST00000609118 1348 ntBASIC18.51■□□□□ 0.55
RFX7Q2KHR2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX7Q2KHR2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 PKD1P1-201ENST00000458669 6805 ntBASIC18.5■□□□□ 0.55
RFX7Q2KHR2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 RNU1-114P-201ENST00000365297 166 ntBASIC18.5■□□□□ 0.55
RFX7Q2KHR2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 BX539320.1-201ENST00000623759 877 ntBASIC18.5■□□□□ 0.55
RFX7Q2KHR2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 AC008687.7-202ENST00000637404 953 ntBASIC18.5■□□□□ 0.55
RFX7Q2KHR2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.5■□□□□ 0.55
RFX7Q2KHR2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.49■□□□□ 0.55
RFX7Q2KHR2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 FAM21FP-201ENST00000426241 1131 ntBASIC18.49■□□□□ 0.55
RFX7Q2KHR2 FAM86HP-204ENST00000513466 959 ntBASIC18.49■□□□□ 0.55
RFX7Q2KHR2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX7Q2KHR2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms