Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 AC107890.1-201ENST00000422478 521 ntBASIC14.4□□□□□ -0.1
SYPL1Q16563 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.4□□□□□ -0.1
SYPL1Q16563 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.4□□□□□ -0.1
SYPL1Q16563 KRT18P43-201ENST00000469825 1281 ntBASIC14.4□□□□□ -0.1
SYPL1Q16563 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.4□□□□□ -0.1
SYPL1Q16563 AC097493.3-201ENST00000509725 367 ntBASIC14.4□□□□□ -0.1
SYPL1Q16563 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.4□□□□□ -0.1
SYPL1Q16563 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.4□□□□□ -0.1
SYPL1Q16563 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.4□□□□□ -0.1
SYPL1Q16563 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
SYPL1Q16563 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.4□□□□□ -0.1
SYPL1Q16563 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SYPL1Q16563 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SYPL1Q16563 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.4□□□□□ -0.1
SYPL1Q16563 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SYPL1Q16563 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SYPL1Q16563 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.4□□□□□ -0.1
SYPL1Q16563 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 AC087499.5-201ENST00000452760 1342 ntBASIC14.4□□□□□ -0.1
SYPL1Q16563 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SYPL1Q16563 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.4□□□□□ -0.11
SYPL1Q16563 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
SYPL1Q16563 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.39□□□□□ -0.11
SYPL1Q16563 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SYPL1Q16563 AC126755.1-201ENST00000525846 6405 ntBASIC14.39□□□□□ -0.11
SYPL1Q16563 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SYPL1Q16563 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.39□□□□□ -0.11
SYPL1Q16563 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.39□□□□□ -0.11
SYPL1Q16563 TREML5P-201ENST00000421694 576 ntBASIC14.39□□□□□ -0.11
SYPL1Q16563 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.39□□□□□ -0.11
SYPL1Q16563 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SYPL1Q16563 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.39□□□□□ -0.11
SYPL1Q16563 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.39□□□□□ -0.11
SYPL1Q16563 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.39□□□□□ -0.11
SYPL1Q16563 AC015911.4-201ENST00000588022 1070 ntBASIC14.39□□□□□ -0.11
SYPL1Q16563 AP001160.2-201ENST00000596071 487 ntBASIC14.39□□□□□ -0.11
SYPL1Q16563 AL844908.2-201ENST00000609461 460 ntBASIC14.39□□□□□ -0.11
SYPL1Q16563 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 AC023908.3-201ENST00000564211 3047 ntBASIC14.39□□□□□ -0.11
SYPL1Q16563 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SYPL1Q16563 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.39□□□□□ -0.11
SYPL1Q16563 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYPL1Q16563 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SYPL1Q16563 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.38□□□□□ -0.11
SYPL1Q16563 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SYPL1Q16563 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SYPL1Q16563 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.38□□□□□ -0.11
SYPL1Q16563 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
SYPL1Q16563 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
SYPL1Q16563 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.38□□□□□ -0.11
SYPL1Q16563 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYPL1Q16563 AL390755.1-201ENST00000623716 2027 ntBASIC14.38□□□□□ -0.11
SYPL1Q16563 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms