Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HTR5BP-201ENST00000430851 1154 ntBASIC11.92□□□□□ -0.5
HIST1H1AQ02539 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 CICP23-201ENST00000605013 2741 ntBASIC11.92□□□□□ -0.5
HIST1H1AQ02539 AC010327.5-201ENST00000586923 3061 ntBASIC11.92□□□□□ -0.5
HIST1H1AQ02539 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AC004832.2-201ENST00000426397 482 ntBASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AC005237.2-201ENST00000434368 219 ntBASIC11.91□□□□□ -0.5
HIST1H1AQ02539 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 CEND1P1-201ENST00000451006 455 ntBASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 ALG1L5P-201ENST00000482043 771 ntBASIC11.91□□□□□ -0.5
HIST1H1AQ02539 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 SLC25A39P2-201ENST00000537614 270 ntBASIC11.91□□□□□ -0.5
HIST1H1AQ02539 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 AL136982.4-201ENST00000437689 1740 ntBASIC11.91□□□□□ -0.5
HIST1H1AQ02539 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HIST1H1AQ02539 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AC005912.2-201ENST00000619492 2400 ntBASIC11.9□□□□□ -0.5
HIST1H1AQ02539 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H1AQ02539 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms